A large body of water surrounded by dense forests and a winding road.

Hotels in Henderson Harbor

Free cancellation options if plans change

Earn rewards on every night you stay

Save more with Member Prices

Check prices for these dates

Tonight

Tomorrow

This weekend

Next weekend

Where to stay in Henderson Harbor?

A building with a balcony overlooking a body of water, surrounded by greenery.

A bar area with a long counter, multiple stools, and shelves stocked with bottles and glasses.

A building with a sign reading "GILLHOUSE" and a stone wall to the left.

A spacious living area with a wooden floor, a sofa, a dining table, and a bar area with a counter and shelves.

1. The GillHouse

Henderson Harbor

$125

$139 total

includes taxes & fees

Oct 15 - Oct 16

A four-poster bed with a canopy, a bedside table with a lamp, a chair, and a television on a stand.

A kitchen with a coffee maker, a fruit bowl, and a bread display.

A marina with multiple boats docked, surrounded by trees and a clear sky.

A building with a flat roof and a parking lot in front.

2. Harbor House Inn

Sackets Harbor

$181

$211 total

includes taxes & fees

Nov 8 - Nov 9

A Holiday Inn Express building with a covered entrance, a landscaped garden, and a parking area.

A hotel lobby with a reception desk, a wooden reception desk, a glass door entrance, and a ceiling light fixture.

An indoor swimming pool with lounge chairs and a clock on the wall.

A hotel room with a bed, a sitting area, a bathroom with a bathtub, and a desk with a lamp.

3. Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG

Watertown

$115

$128 total

includes taxes & fees

Nov 12 - Nov 13

A Ramada hotel entrance with a clear sky, a red awning, and two potted plants.

A gazebo with a white railing and a tiled roof, surrounded by grass and potted plants.

A lobby with a reception desk, seating area, and a large potted plant.

A hotel room with a bed, a TV, a desk, and two lamps.

4. Ramada by Wyndham Watertown/Thousand Islands NY

Watertown

$85

$94 total

includes taxes & fees

Nov 5 - Nov 6

A hotel lobby with a bar area, seating arrangements, and a television mounted on the wall.

A reception desk with a "Welcome to Watertown" sign, framed pictures, and a "Hilton Honors" sign.

A gym with treadmills, elliptical machines, and free weights.

A hotel room with a large bed, a desk with a lamp, a chair, and a view of the outdoors.

5. Hampton Inn Watertown

Watertown

$99

$110 total

includes taxes & fees

Oct 29 - Oct 30

A hotel room with a large bed, a nightstand, a lamp, a chair, and a window with curtains.

An indoor swimming pool with clear blue water, lounge chairs, and a sunbed area.

A hotel kitchen with wooden cabinets, granite countertops, and a coffee station with various coffee makers and containers.

A spacious lobby with a fireplace, blue armchairs, and a chandelier.

6. Comfort Inn & Suites Watertown - 1000 Islands

Watertown

$95

$106 total

includes taxes & fees

Nov 5 - Nov 6

A sign with the text 'It only takes a spark' and a yellow star, a glass door leading to an interior space, and a yellow chair.

A modern interior with tables and chairs, a ceiling with recessed lighting, and a wall with abstract art.

A gym with various exercise machines, a television, and a green wall.

A hotel room with a bed, a television, a desk, and a window.

7. Spark by Hilton Watertown

Watertown

$81

$90 total

includes taxes & fees

Oct 29 - Oct 30

A gazebo with a stone fire pit in the center, surrounded by outdoor seating and a brick pathway.

A hotel pool area with multiple hot tubs, a reception desk, and seating areas.

A spacious lobby with a patterned carpet, wooden beams, and a reception desk.

A covered outdoor seating area with stone pillars, a high-roofed pavilion, and a view of the Hilton Garden Inn hotel in the background.

8. Hilton Garden Inn Watertown/Thousand Islands

Watertown

$147

$163 total

includes taxes & fees

Nov 6 - Nov 7

A vending machine with various snacks and drinks.

A lobby with a reception desk, a red vending machine, a black leather couch, and a patterned floor.

A hotel room with a bed, a sofa, a desk, a lamp, a window with curtains, and a bathroom with a sink and mirror.

9. Travel Inn

Watertown

$68

$75 total

includes taxes & fees

Nov 1 - Nov 2

A hotel lobby with a stone wall, green upholstered chairs, a round white table, and a beige sofa.

A multi-story hotel with a prominent entrance, a covered lobby area, and a well-lit facade.

A swimming pool with a changing room, sun loungers, and a hot tub area.

A modern dining area with multiple tables and chairs, pendant lighting, and artwork on the walls.

10. Fairfield Inn & Suites Watertown Thousand Islands

Watertown

$125

$139 total

includes taxes & fees

Nov 1 - Nov 2

A room with a bed, a chair, a table, and a lamp.

A bathroom with a bathtub, a shower, and a toilet.

A hotel room with two beds, a desk, a chair, a lamp, and a window with blinds.

A hotel room with a bed, a desk, a chair, and a small table.

11. Allen's Budget Motel

Watertown

$60

$67 total

includes taxes & fees

Oct 14 - Oct 15

A hotel room with a bed, a bathroom with a bathtub, and a picture on the wall.

A pair of white front-loading washers in a laundry room with a tiled floor.

A Days Inn hotel with a two-story structure, a covered entrance, and a parking lot.

A breakfast area with wooden furniture, a coffee machine, and a sign that reads "Daybreak Breakfast".

12. Days Inn by Wyndham Watertown Fort Drum

Calcium

$65

$72 total

includes taxes & fees

Nov 8 - Nov 9

A modern living room with a flat-screen TV, comfortable seating, and a fireplace.

A modern kitchen area with a coffee machine, a fresh juice dispenser, and a breakfast bar.

A modern building with a covered entrance, multiple windows, and a parking lot.

A reception area with a marble counter, pendant lighting, and a tiled floor.

13. Quality Inn & Suites Watertown Fort Drum

Calcium

$58

$65 total

includes taxes & fees

Nov 5 - Nov 6

An indoor swimming pool with clear water, surrounded by lounge chairs and tables, and large windows allowing natural light.

A hotel room with two beds, red walls, and a nightstand with a lamp.

A building with a sign reading "Adirondack Efficiencies."

A wooden desk with a flat-screen TV, a mirror, and a coffee maker.

14. Adirondack Efficiencies Watertown

Watertown

$70

$78 total

includes taxes & fees

Nov 1 - Nov 2

A modern bedroom with a bed, bedside lamp, air conditioning unit, and a mounted TV displaying a streaming service interface.

A bathroom with a white sink, a modern faucet, and a blue soap dispenser.

A Nest Inn sign, a parking area, and a building with a red exterior.

A building with a red exterior and a covered parking area.

15. Nest Inn

Watertown

$56

$68 total

includes taxes & fees

Oct 26 - Oct 27

A wooden deck with a table and chairs, overlooking a lake with boats and a dock.

A hallway with a white door, wooden flooring, and an archway leading to a dining area.

A wooden dock extending into a body of water, a staircase leading to a house, and a covered outdoor area with an umbrella.

A spacious living area with a wooden floor, a sofa, a chair, and a dining table. There is a large window with a view of a snowy landscape.

16. Family Cottage on Chaumont Bay, Walk to Downtown

Chaumont

$224

$452 total

includes taxes & fees

Oct 13 - Oct 14

A wooden exterior door with a glass panel, a stone step, and a metal doormat.

A building with a sign reading "ROYAL INN" and a car parked in front.

A hotel room with two beds, a nightstand with a lamp, and two framed pictures on the wall.

A hotel reception area with a white door, a reception desk, and a sign indicating the Royal Inn Office.

17. Royal Inn Motel

Watertown

$62

$69 total

includes taxes & fees

Oct 13 - Oct 14

A hotel room with two beds, a desk with a coffee maker, a TV, and a view of trees through the window.

A kitchen with open shelves, a microwave, and a toaster.

A modern living room with a flat-screen TV, a wooden coffee table, a sofa, a bookshelf, and a patterned rug.

A hotel with a prominent "CANDLEWOOD SUITES" sign, a parking lot, and a building with a mix of red and blue facades.

18. Candlewood Suites Watertown Fort Drum by IHG

Evans Mills

$116

$129 total

includes taxes & fees

Oct 22 - Oct 23

View all properties

Go beyond your typical stay in Henderson Harbor

Top landmarks in Henderson Harbor

Saiff Charters

Saiff Charters is 0.3 mi (0.5 km) from central Henderson Harbor, why not stop by during your stay.

See properties

Learn more about Henderson Harbor

Henderson Harbor is well-known for its attractions such as Lake Ontario and Saiff Charters.

See all hotels in Henderson Harbor

Check out reviews of Henderson Harbor hotels guests love

The GillHouse

Henderson Harbor

10/10 Exceptional

Travis

Harbor House Inn

Sackets Harbor

10/10 Exceptional

Upon arrival our 2 rooms were upgraded from the 3rd floor to 2nd (main) floor and a refrigerator was delivered for our convenience. We were pleasantly surprised at the quality and quantity of breakfast items we discovered both mornings; including fresh apricots! Would highly recommend the Inn and the variety of delightful restaurants within walking distance. Our favorites, as always, are Tin Pan Galley and Good Fellos!

Denise

Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG

Watertown

10/10 Exceptional

Jane

Hampton Inn Watertown

Watertown

10/10 Exceptional

Charlene

Hilton Garden Inn Watertown/Thousand Islands

Watertown

10/10 Exceptional

We enjoyed our stay at Hilton Garden in, it's basically just off the highway in the middle of a strip mall but you wouldn't know this once you are inside. It's a little oasis in a sea of concrete. The rooms were lovely and the beds very comfortable. The staff were very helpful at the front desk and it was a bonus to have a small pool and gym. We were especially impressed by one staff member (I wish I could remember his name) who accommodated our needs at the bar after 9pm. It's a great base to...

TazAid

Comfort Inn & Suites Watertown - 1000 Islands

Watertown

10/10 Exceptional

Samuel

Fairfield Inn & Suites Watertown Thousand Islands

Watertown

10/10 Exceptional

paula

Ramada by Wyndham Watertown/Thousand Islands NY

Watertown

10/10 Exceptional

Wayne

Spark by Hilton Watertown

Watertown

10/10 Exceptional

Gustavo

Allen's Budget Motel

Watertown

10/10 Exceptional

Pat

Days Inn by Wyndham Watertown Fort Drum

Calcium

10/10 Exceptional

James

Quality Inn & Suites Watertown Fort Drum

Calcium

10/10 Exceptional

Candlewood Suites Watertown Fort Drum by IHG

Evans Mills

10/10 Exceptional

Stephen

Royal Inn Motel

Watertown

10/10 Exceptional

Steven

Frequently Asked Questions

What accommodations do travelers like in Henderson Harbor?

Guests like The GillHouse.

Can I book refundable accommodations in Henderson Harbor?

If you want the flexibility to change your plans to Henderson Harbor, most hotels provide refundable* bookable rates. You can see these accommodations by searching our site and using the "fully refundable" filter to narrow down the results.

Where should I stay in Henderson Harbor if I'm looking for an affordable accommodation?

An inexpensive option worth considering is The GillHouse.

What will the weather in Henderson Harbor be like during my vacation?

July and August are typically the warmest months in Henderson Harbor when the average temp is 66°F. January and February are the coldest months when the average temperature is 27°F. October and July are the months with the most rain.

Why should I book my Henderson Harbor hotel with Hotels.com?

There are lots of reasons to book your Henderson Harbor trip with us: our free cancellations on selected hotels* gives you flexibility, and with One Key™, our rewards program, you will be able to earn and use OneKeyCash™** on all eligible bookings such as hotels, car rentals, flights, vacation rentals and more on Hotels.com, Expedia and Vrbo.